BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H06LP1|AL428802
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1666 801 0.0
3x_Contig1304 236 7e-62
>3x_Contig1666
Length = 16162
Score = 801 bits (404), Expect = 0.0
Identities = 440/452 (97%)
Strand = Plus / Minus
Query: 481 taattgggagcggaccaaacagtggtgactttccctccaaaataatcctgatatccctcg 540
||||||||||||| ||||||||||||||||| | ||||| ||||||| ||| ||
Sbjct: 16059 taattgggagcgggccaaacagtggtgacttgggggggagaataagcctgatagcccgcg 16000
Query: 541 ttacatagttgatgagctctgagcatctttgtgacaccattgatgctaaaaaatttgtcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15999 ttacatagttgatgagctctgagcatctttgtgacaccattgatgctaaaaaatttgtcc 15940
Query: 601 actatagctttaccgaaagtgtaaccagcacctctcggtgagactttgaattgtgaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15939 actatagctttaccgaaagtgtaaccagcacctctcggtgagactttgaattgtgaagaa 15880
Query: 661 gtgatatcgtttctgtcgtcttcagggtctgaccagaccaaatctgccatggcgccatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15879 gtgatatcgtttctgtcgtcttcagggtctgaccagaccaaatctgccatggcgccatca 15820
Query: 721 tgtgggatttctctgatcctatcgataatccgtatttgatcaatggattgaatattgggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15819 tgtgggatttctctgatcctatcgataatccgtatttgatcaatggattgaatattgggt 15760
Query: 781 gaaagtccaccatgaacgcagaaaattgtatcatcaatgatacatgcaagaatcaaataa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15759 gaaagtccaccatgaacgcagaaaattgtatcatcaatgatacatgcaagaatcaaataa 15700
Query: 841 tcgaatagatccgtgaaatactgccatacttgacttccctcgccaaatttgttcaaacat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15699 tcgaatagatccgtgaaatactgccatacttgacttccctcgccaaatttgttcaaacat 15640
Query: 901 tccgtataaaaaccataactctgggtgatctg 932
||||||||||||||||||||||||||||||||
Sbjct: 15639 tccgtataaaaaccataactctgggtgatctg 15608
>3x_Contig1304
Length = 6732
Score = 236 bits (119), Expect = 7e-62
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1 tccaagattgtgctacaaaaaggtggtagcgtattgaaagatcacataactttagaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6614 tccaagattgtgctacaaaaaggtggtagcgtattgaaagatcacataactttagaagat 6673
Query: 61 tatgaagttcacgacggaactaatttggagttgtattatgtgtaagtttgtaaaaacat 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6674 tatgaagttcacgacggaactaatttggagttgtattatgtgtaagtttgtaaaaacat 6732
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7298
Number of Sequences: 1807
Number of extensions: 7298
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 2
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)